members

Research

Publications

List of Publications

Conferences

18. A. Fleishman Littlejohn, A. Bigando, E. Bae, and A.K. Bhunia, "Light-scattering Sensor for Real-time Identification of Vibrio parahaemolyticus and V. vulnificus colonies", 11th General meeting for American Society for Microbiology, 2011

17. Y. Tang, A. Singh, E. Bae, E.D. Hirleman, and A.K. Bhunia, "Differentiation of Serovars of Escherichia coli colonies using optical forward-scattering sensor", 11th General meeting for American Society for Microbiology, 2011 

16. B. Rajwa, M. M. Dundar, F. Akova, V. Patsekin, E. Bae, Y. Tang, J.E. Dietz, E.D. Hirleman, J. P. Robinson, and A.K Bhunia, ¡°Digital microbiology: detection and classification of unknown bacterial pathogens using a label-free laser light scatter-sensing system¡± Proceedings of SPIE, accepted, 2011.

15. N. Bai, Y. Tang, A.K Bhunia, E.D. Hirleman, and  E. Bae, "Experimental characterization of bacterial microcolonies via the developed optical morphology analyzer" Proceedings of SPIE, accepted, 2011.

14. N. Bai, E. Bae, A. Aroonnual, A.K Bhunia, J.P. Robinson and E.D. Hirleman, "Morphology characterization of bacterial colonies for predicting forward scattering patterns" OSA Optics and Photonics Congress,Karlsruhe, Germany, 2010.

13. E. Bae, N. Bai, A. Aroonnual, A.K Bhunia, J.P. Robinson and E.D. Hirleman, "Prediction of the light scattering patterns from bacterial colonies by a time-resolved Reaction-diffusion model and scalar diffraction theory" Proceedings of SPIE, 7315, 2009.

12. N. Bai, E. Bae, A. Aroonnual, A.K Bhunia, J.P. Robinson and E.D. Hirleman, "Development of a real-time system of monitoring the bacterial growth and registering the forward scattering pattern" Proceedings of SPIE, 7315, 2009.

11. B. Rajwa, M. Dundar, V. Patsekin, K. Huff, A. K. Bhunia, M. Venkatapathi, E. Bae, E.D. Hirleman, and J.P. Robinson,  "Morphotypic analysis and classification of bacteria and bacterial colonies using laser lightscattering, pattern recognition, and machine-learning system" Proceedings of SPIE, 7306, 2009.

10. E. Bae, P.P. Banada, A.K Bhunia, and E.D. Hirleman, "Label-free detection of multiple bacterial pathogens using light scattering sensor" 21st International Committee on Food Microbiology and Hygiene, P158, 2008.

9. E. Bae, P.P. Banada, A.K Bhunia, and E.D. Hirleman, "Development and optimization of two-dimensional centering algorithm for the bacteria rapid detection using optical scattering technology (BARDOT) platform"  Proceedings of SPIE, 6849, 2008.

8. B. Rajwa, B. Bayraktar, P.P. Banada, K. Huff,  E. Bae, E.D. Hirleman, A.K Bhunia, and J.P. Robinson, "Phenotypic analysis of bacterial colonies using laser light scatter and pattern-recognition techniques" Proceedings of SPIE, 6864, 2008.

7. B. Rajwa, B. Bayraktar, P.P. Banada, K. Huff,  E. Bae, E.D. Hirleman, A.K Bhunia, and J.P. Robinson, "Noninvasive forward-scattering system for rapid detection, characterization, and identification of bacterial colonies" Proceedings of SPIE, 6554, 2007.

6. K. Huff, P.P. Banada, E. Bae, B. Bayraktar, B. Rajwa, J.P. Robinson, E.D. Hirleman, G.P. Richard, and A.K Bhunia, "Detection and identification of foodborne pathogens in genus and species levels using a noninvasive  modified light scatterometer-BARDOT" General Meeting of the American Society for Microbiology, V:106, 455-456, 2006.

5. E. Bae, P.P. Banada, A.K Bhunia, and E.D. Hirleman, "Bio-physical modeling of time-resolved forward scattering by Listeria colonies" Proceedings of SPIE, 6381, 2006.

4. B. Rajwa, B. Bayraktar, P.P. Banada, K. Huff,  E. Bae, E.D. Hirleman, A.K Bhunia, and J.P. Robinson, "Noninvasive forward-scattering system for rapid detection, characterization, and identification of Listeria colonies: image-processing and data analysis" Proceedings of SPIE, 6381, 2006.

3. E.W. Bae, J.A. Kim, S.H. Kim, and Y.K. Kwak, "Micro-motion measurement systems for milli-structure using diffraction grating" Proceedings of SPIE, 4190, 71-79, 2001.

2. J.A. Kim, K.C. Kim, E.W. Bae, S.H. Kim, and Y.K. Kwak, "Micro-motion measurement systems for millistructure using diffraction grating" Proceedings of SPIE, 3945, 150-157, 2000.                                                                                                                                                   

1. J.A. Kim, K.C. Kim,  E.W. Bae, S.H. Kim, and Y.K.Kwak, "Six-degree-of-freedom displacement sensing method using a diffraction grating as a cooperative target" IEEE instrumentation and Measurement technology conference,  582-586, 2000.

Peer Reviewed Journals

19. K. Huff, A. P. Padmapriya, Aroonnual, E. Bae, B. Bayraktar, B. Rajwa, E.D. Hirleman, J.P. Robinson, G.P. Richards, and A.K. Bhunia, "Detection and identification of Vibrio species using a novel optical forward light scattering sensor", Journal of Clinical Microbiology, in preparation, 2011.

18. Y. Tang , E. Bae, A. Aroonnual, A.K. Bhunia, and E.D. Hirleman "Differentiation of Escherichia coli strain O157:H7 from other O-antigenic E. coli strains using BARDOT technology", Journal of Food Engineering, in preparation, 2011.

17. E. Bae, N. Bai, and E.D. Hirleman "Application of sampling criterion on numerical diffraction from bacterial colonies", Applied Optics, Vol. 50, No. 11, pp.1234-1245, 2011.

16. E. Bae, A. Aroonnual, A.K. Bhunia, and E.D. Hirleman "On the sensitivity of forward scattering patterns from bacterial colonies to media composition", Journal of Biophotonics, Vol. 4, No. 4, pp. 236-243, 2011.

15. E. Bae, N. Bai, A. Aroonnual, A.K. Bhunia, and E.D. Hirleman "Label-free identification of bacterial microcolonies via elastic scattering", Biotechnology and Bioengineering, Vol. 108, No. 3, pp.637-644, 2011.

14. E. Bae, N. Bai, A. Aroonnual, A.K. Bhunia, J.P. Robinson, and E.D. Hirleman "Modeling the propagation of light through bacterial colonies and their correlation to the forward scattering patterns", Journal of Biomedical Optics, Vol. 15, 019004, 2010.

13. E. Bae, A. Aroonnual, A.K. Bhunia, J.P. Robinson, and E.D. Hirleman "System automation for a bacterial colony detection and identification instrument via forward scattering", Measurement Science and Technology, Vol. 20, 015802, 2009.

12. E. Bae, and E.D. Hirleman, "Computational analysis and diagonal preconditioning for the discrete dipole approximation on surface", Journal of Quantitative Spectroscopy and Radiative Transfer, Vol. 110, pp.51-61, 2009.

11. P.P. Banada, K. Huff, Amornrat Aroonnual,  E. Bae, B. Rajwa, B. Bayraktar, A. Adil, J.P. Robinson, E.D. Hirleman, and A.K. Bhunia, "Label-free detection of multiple bacterial pathogens using light scattering sensor", Biosensors and Bioelectronics, Vol. 24, pp.1685-1692, 2009.

10. E. Bae, H. Zhang, and E.D. Hirleman, "Application of discrete dipole approximation for dipoles embedded in film", Journal of Optical Society of America A, Vol. 25, No. 7, pp.1728-1736, 2008.

9. E. Bae, P.P. Banada, K. Huff, A.K. Bhunia, J.P. Robinson, and E.D. Hirleman, "Analysis of time-resolved scattering from macroscale bacterial colonies", Journal of Biomedical Optics, Vol. 13, 014010, 2008.

8. E. Bae, and E.D. Hirleman, "Extending the applicability of the discrete dipole approximation for multi-scale features on surface", Journal of Quantitative Spectroscopy and Radiative Transfer, Vol. 107, pp.470-478, 2007.

7. E. Bae, P.P. Banada, K. Huff, A.K. Bhunia, J.P. Robinson, and E.D. Hirleman, "Biophysical modeling of forward scattering from bacterial colonies using scalar diffraction theory", Vol. 46, No. 17, pp.3639-3648,
2007.

6. P.P. Banada, S. Guo, B.Bayraktar, E. Bae, B. Rajwa, J.P. Robinson, E.D. Hirleman, and A.K Bhunia, "Optical forward-scattering for detection of Listeria monocytogenes and other Listeria species", Biosensors and Bioelectronics, 22, 1664-1671, 2007.

5. J. Kim,  E.W. Bae, S.H.Kim, and Y.K. Kwak, "Design methods for six-degree-of-freedom displacement measurement systems using cooperative targets", Precision Engineering, Vol.26, No. 1, pp.99 - 104, 2002.

4. E.W. Bae, J.Kim, and S.H Kim, "Multi-degree-of-freedom displacement measurement system for millistructures", Measurement Science and Technology, Vol.12, No. 9, pp.1495 - 1502, 2001.

3. J.Kim, E.W. Bae, and S.H Kim, "Application of sensitivity analysis for the design of six-degree-of-freedom measurement system", Optical Engineering, Vol.40, No. 12, pp.2837 - 2844, 2001.

2. J.Kim,  E.W. Bae, and S.H Kim, "Multidimensional motion measurement of a bimorph-type piezoelectric actuator using a diffraction grating target", Review of Scientific Instrument, Vol.72, No. 9, pp.3731 - 3733, 2001.

1. J.A. Kim, K.C. Kim,  E.W. Bae, S.H. Kim, and Y.K. Kwak, "Six Degree of Freedom Displacement
Measurement System Using a Diffraction Grating", Review of Scientific Instrument, Vol. 71, No. 8, pp. 3214-3219, 200

Book chapters

3. A.K. Bhunia, V. Nanduri, E. Bae, and E.D. Hirleman "Biosensors, Foodborne Pathogen Detection", Encyclopedia of Industrial Biotechnology: Bioprocess, Bioseparation, and Cell Technology Flickinger, M.C. (ed), John Wiley &Sons, Inc,. Hoboken, NJ 2009. 

 2. A.K. Bhunia, E. Bae, B. Rajwa, J.P. Robinson, and E.D. Hirleman "Utilization of optical forward scatter image biological database: food-borne pathogen colony differentiation and detection", Omics and Biometrics in Food safety, Xianghe Yan, Vijay Juneja, Lihan Huang (ed), DEStech Publications, Inc,. Lancaster, PA 2010 (in press). 

1. E. Bae and A.K.Bhunia "Harnessing nano-optical Sensors for food safety and security", Optochemical nanosensors, Michele Giordano (ed), Talyor & Francis Group, New York, NY 2011 (in preparation).

Patents

 

2. E.D. Hirleman, S. Guo, A.K. Bhunia, E. Bae, "System and Method for Rapid Detection and Characterization of Bacterial Colonies Using Forward Light Scattering", US7,465,560.

1. J.P. Robinson, B. Rajwa, B. Bayraktar, A.K. Bhunia, E.D. Hirleman, E. Bae, "System and Method for Organism Identification", Application No. 12/008476 pending.

 

 

 

 

 

 

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